Function reference
-
read_trialmaster()
- Read the
.zip
archive of a TrialMaster export
-
read_tm_all_xpt()
- Read all
.xpt
files in a directory
-
edc_data_warn()
- Standardized warning system
-
assert_no_duplicate()
- Assert that a dataframe has one row per patient
-
assert_no_rows()
- Assert that a dataframe has no rows
-
check_subjid()
- Check the completion of the subject ID column
-
find_keyword()
- Find a keyword in the whole database
-
lastnews_table()
- Get a table with the latest date for each patient
-
get_common_cols()
summary(<common_cols>)
- Get columns that are common to multiple datasets
-
ae_table_grade_max()
- Summary tables for AE by grade max
-
ae_table_grade_n()
- Summary tables for AE
-
ae_table_soc()
as_flextable(<ae_table_soc>)
- Summary tables for AE by SOC
-
ae_plot_grade_max()
- Graphic representation of AEs by grade max
-
ae_plot_grade_n()
- Graphic representation of AEs
-
ae_plot_soc()
- Graphic representation of AEs by soc (Butterfly plot)
-
waterfall_plot()
- Generate a waterfall plot
-
edc_options()
- Set global options for
EDCimport
-
edc_peek_options()
- See which
EDCimport
option is currently set.
-
edc_reset_options()
- Reset all
EDCimport
options.
-
edc_swimmerplot()
- Swimmer plot of all dates columns
-
unify()
- Unify a vector
-
fct_yesno()
get_yesno_lvl()
- Format factor levels as Yes/No
-
table_format()
- Identify if a dataframe has a long or a wide format
-
save_plotly()
- Save a plotly to an HTML file
-
get_datasets()
- Retrieve the datasets as a list of data.frames
-
get_meta_cols()
- Get columns shared by most datasets
-
get_subjid_cols()
get_crfname_cols()
- Get key column names
-
get_key_cols()
- Important column names
-
split_mixed_datasets()
- Split mixed datasets
-
get_lookup()
- Retrieve the lookup table from options
-
extend_lookup()
- Extend the lookup table
-
build_lookup()
- Generate a lookup table
-
load_list()
- Load a list in an environment
-
load_as_list()
- Load a
.RData
file as a list
-
save_list()
- Save a list as
.RData
file
-
edc_example_mixed()
edc_example_plot()
edc_example()
edc_example_ae()
- Example databases
-
manual_correction()
reset_manual_correction()
- Manual correction