Draw a gridplot giving, for each patient and each dataset, whether the patient is present in the dataset. Data are drawn from get_datasets.
Usage
edc_patient_gridplot(
sort_rows = TRUE,
sort_cols = TRUE,
gradient = FALSE,
axes_flip = FALSE,
show_grid = TRUE,
preprocess = NULL,
palette = c(Yes = "#00468BFF", No = "#ED0000FF"),
datasets = get_datasets(),
lookup = edc_lookup()
)Arguments
- sort_rows
whether to sort patients from "present in most datasets" to "present in least datasets"
- sort_cols
whether to sort datasets from "containing the most patients" to "containing the least patients"
- gradient
whether to add a color gradient for repeating measures
- axes_flip
whether to flip the axes, so that patients are on the Y axis and datasets on the X axis
- show_grid
whether to show the grid
- preprocess
a function to preprocess the patient ID, e.g.
as.numeric, or a custom function with string replacement- palette
the colors to use
- datasets, lookup
internal
Examples
if (FALSE) { # \dontrun{
tm = read_trialmaster("path/to/archive.zip")
load_database(db)
edc_patient_gridplot(sort_rows=FALSE, sort_cols=FALSE)
edc_patient_gridplot(axes_flip=TRUE, show_grid=TRUE,
preprocess=~str_remove(.x, "\\D*")) #remove all non-digits
} # }